C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308275 FBXO22-001 ENSG00000167196 9606 + 15:75903859-75942510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000308275
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000308275 0.160±0.00 0.291±0.00 0.511±0.00 0.405±0.00 0.673±0.33 0.178±0.00 0.093±0.00 0.418±0.21 0.182±0.04 0.860±0.00 0.796±0.00 0.330±0.05 0.414±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024C CIL_00024C_0001 CGP 15:75843285-75942510
CIL_000249 CIL_000249_0001 CGP 15:75903859-76059795

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006464 TAS cellular protein modification process
GO:0006511 TAS ubiquitin-dependent protein catabolic process
GO:0006913 IEA nucleocytoplasmic transport
GO:0009267 IEA cellular response to starvation
GO:0010830 IEA regulation of myotube differentiation
GO:0032436 IEA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0048742 IEA regulation of skeletal muscle fiber development
GO:2000060 IEA positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034859 Fbxo22-001 protein_coding Mus_musculus 0 1472
ENSMUST00000146201 Fbxo22-003 protein_coding Mus_musculus 0 1349
ENSMUST00000153970 Fbxo22-002 nonsense_mediated_decay Mus_musculus 0 1349
ENSMUST00000140375 Fbxo22-004 nonsense_mediated_decay Mus_musculus 0 752
ENSMUST00000133795 Fbxo22-005 protein_coding Mus_musculus 0 503
ENSMUST00000164721 Nrg4-201 protein_coding Mus_musculus 0 224
ENSMUST00000139261 Nrg4-003 processed_transcript Mus_musculus 0 224

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