C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569022 FBXO22-004 ENSG00000167196 9606 + 15:75903878-75934107 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000569022
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000569022 1.874±0.00 1.521±0.00 1.746±0.00 1.960±0.50 2.089±0.54 3.403±0.01 1.402±0.48 4.073±0.73 2.485±0.42 2.468±0.81 0.980±0.49 3.214±0.21 3.904±1.05 3.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024C CIL_00024C_0001 CGP 15:75843285-75942510
CIL_000249 CIL_000249_0001 CGP 15:75903859-76059795

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0006464 TAS cellular protein modification process
GO:0006511 TAS ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146201 Fbxo22-003 protein_coding Mus_musculus 0 1195
ENSMUST00000153970 Fbxo22-002 nonsense_mediated_decay Mus_musculus 0 1195
ENSMUST00000034859 Fbxo22-001 protein_coding Mus_musculus 0 1195
ENSMUST00000140375 Fbxo22-004 nonsense_mediated_decay Mus_musculus 0 752
ENSMUST00000133795 Fbxo22-005 protein_coding Mus_musculus 0 501
ENSMUST00000164721 Nrg4-201 protein_coding Mus_musculus 0 224
ENSMUST00000139261 Nrg4-003 processed_transcript Mus_musculus 0 224

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