C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetraspanin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034876 Tspan3-201 ENSMUSG00000032324 10090 - 9:56135885-56161070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034876
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034876 136.409±5.44 139.260±21.95 77.370±9.47 122.219±31.57 123.450±10.16 333.210±47.90 114.013±18.57 168.834±6.86 8.956±5.86 66.584±3.82 44.457±4.21 132.986±51.21 38.457±8.90 31.290±10.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NQ CIL_0003NQ_0003 CGP 9:56089962-56161070
CIL_0001UP CIL_0001UP_0002 CGP 9:56135885-56418067

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267970 TSPAN3-001 protein_coding Homo_sapiens 0 1254
ENST00000346495 TSPAN3-002 protein_coding Homo_sapiens 0 706
ENST00000424443 TSPAN3-003 protein_coding Homo_sapiens 0 811
ENST00000558394 TSPAN3-011 processed_transcript Homo_sapiens 0 444
ENST00000558745 TSPAN3-008 protein_coding Homo_sapiens 0 1064
ENST00000559494 TSPAN3-004 protein_coding Homo_sapiens 0 706
ENST00000560514 TSPAN3-010 retained_intron Homo_sapiens 0 444
ENST00000560715 TSPAN3-005 retained_intron Homo_sapiens 0 708
ENST00000561277 TSPAN3-012 protein_coding Homo_sapiens 0 1068

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