C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003NQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053568-ENSDARG00000053559 CGP 7955 7:31387996-31419439
GeneTranscriptPositionBiotype
ENSDARG00000053559 (tspan3b)
tetraspanin 3b 		ENSDART00000075600 (tspan3b-001) 31414115-31419439 protein_coding
ENSDARG00000053568 (pstpip1b)
proline-serine-threonine phosphatase interacting protein 1b 		ENSDART00000075609 (pstpip1b-001) 31387996-31402184 protein_coding
ENSDART00000142033 (pstpip1b-002) 31388388-31393704 protein_coding
CIL_0003NQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140368-ENSG00000140391 CGP 9606 15:76993359-77083984
GeneTranscriptPositionBiotype
ENSG00000140368 (PSTPIP1)
proline-serine-threonine phosphatase interacting protein 1 		ENST00000379595 (PSTPIP1-002) 76995131-77037331 protein_coding
ENST00000557995 (PSTPIP1-011) 77028343-77037313 processed_transcript
ENST00000558012 (PSTPIP1-001) 76995085-77037332 protein_coding
ENST00000558407 (PSTPIP1-012) 76993359-77025582 protein_coding
ENST00000558870 (PSTPIP1-010) 77032317-77037332 protein_coding
ENST00000559161 (PSTPIP1-017) 76995419-77030574 protein_coding
ENST00000559295 (PSTPIP1-009) 76995574-77037331 protein_coding
ENST00000559750 (PSTPIP1-006) 76995172-77031761 nonsense_mediated_decay
ENST00000559785 (PSTPIP1-003) 76994680-77037301 nonsense_mediated_decay
ENST00000559795 (PSTPIP1-005) 76995126-77024427 retained_intron
ENST00000559856 (PSTPIP1-015) 77018458-77032393 protein_coding
ENST00000559859 (PSTPIP1-013) 77015811-77028598 protein_coding
ENST00000560064 (PSTPIP1-016) 77035694-77037332 retained_intron
ENST00000560223 (PSTPIP1-004) 76995122-77037216 nonsense_mediated_decay
ENST00000560377 (PSTPIP1-007) 76995385-77032863 retained_intron
ENST00000560621 (PSTPIP1-018) 76995362-77025318 processed_transcript
ENST00000560796 (PSTPIP1-008) 76995412-77029556 nonsense_mediated_decay
ENST00000561315 (PSTPIP1-014) 77027725-77031326 retained_intron
ENSG00000140391 (TSPAN3)
tetraspanin 3 		ENST00000267970 (TSPAN3-001) 77041404-77071228 protein_coding
ENST00000346495 (TSPAN3-002) 77046030-77071109 protein_coding
ENST00000424443 (TSPAN3-003) 77046030-77071109 protein_coding
ENST00000558394 (TSPAN3-011) 77054181-77071109 processed_transcript
ENST00000558745 (TSPAN3-008) 77046332-77083984 protein_coding
ENST00000559373 (TSPAN3-009) 77069867-77071092 processed_transcript
ENST00000559494 (TSPAN3-004) 77046084-77071034 protein_coding
ENST00000560514 (TSPAN3-010) 77055836-77071109 retained_intron
ENST00000560715 (TSPAN3-005) 77046030-77055934 retained_intron
ENST00000561277 (TSPAN3-012) 77046060-77071122 protein_coding
ENSG00000269951 (RP11-797A18.6)
 ENST00000602975 (RP11-797A18.6-001) 77067654-77068325 sense_intronic
ENSG00000278991 (RP11-797A18.5)
 ENST00000624777 (RP11-797A18.5-001) 77063397-77064910 TEC
CIL_0003NQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032322-ENSMUSG00000032324 CGP 10090 9:56089962-56161070
GeneTranscriptPositionBiotype
ENSMUSG00000032322 (Pstpip1)
proline-serine-threonine phosphatase-interacting protein 1 		ENSMUST00000059206 (Pstpip1-001) 56089962-56128888 protein_coding
ENSMUST00000132800 (Pstpip1-006) 56123055-56125992 retained_intron
ENSMUST00000135103 (Pstpip1-005) 56122090-56123757 retained_intron
ENSMUST00000138646 (Pstpip1-003) 56089976-56128872 retained_intron
ENSMUST00000142894 (Pstpip1-007) 56123055-56124047 retained_intron
ENSMUST00000144638 (Pstpip1-004) 56120287-56125933 processed_transcript
ENSMUST00000147360 (Pstpip1-002) 56089976-56128876 retained_intron
ENSMUSG00000032324 (Tspan3)
tetraspanin 3 		ENSMUST00000034876 (Tspan3-201) 56135885-56161070 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NQ_0001ENSDARG00000053559ENSDART00000075600ENSDARG00000053568ENSDART00000075609ENSDART00000142033CIL_0003NQ_0002ENSG00000140368ENST00000379595ENST00000557995ENST00000558012ENST00000558407ENST00000558870ENST00000559161ENST00000559295ENST00000559750ENST00000559785ENST00000559795ENST00000559856ENST00000559859ENST00000560064ENST00000560223ENST00000560377ENST00000560621ENST00000560796ENST00000561315ENSG00000140391ENST00000267970ENST00000346495ENST00000424443ENST00000558394ENST00000558745ENST00000559373ENST00000559494ENST00000560514ENST00000560715ENST00000561277ENSG00000269951ENST00000602975ENSG00000278991ENST00000624777CIL_0003NQ_0003ENSMUSG00000032322ENSMUST00000059206ENSMUST00000132800ENSMUST00000135103ENSMUST00000138646ENSMUST00000142894ENSMUST00000144638ENSMUST00000147360ENSMUSG00000032324ENSMUST00000034876
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NQ_0001ENSDARG00000053559ENSDART00000075600ENSDARG00000053568ENSDART00000075609CIL_0003NQ_0002ENSG00000140368ENST00000379595ENST00000557995ENST00000558012ENST00000558407ENST00000558870ENST00000559161ENST00000559295ENST00000559750ENST00000559785ENST00000559795ENST00000559856ENST00000560064ENST00000560223ENST00000560377ENST00000560621ENST00000561315ENSG00000140391ENST00000267970ENST00000346495ENST00000424443ENST00000558745ENST00000561277ENSG00000269951ENST00000602975ENSG00000278991ENST00000624777CIL_0003NQ_0003ENSMUSG00000032322ENSMUST00000059206ENSMUST00000132800ENSMUST00000135103ENSMUST00000138646ENSMUST00000142894ENSMUST00000144638ENSMUST00000147360ENSMUSG00000032324ENSMUST00000034876
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053559 ENSDART00000075600 N/A N/A N/A 12.272±9.64 N/A N/A N/A 0.225±0.00 N/A N/A 0.869±0.00 N/A N/A N/A
ENSDARG00000053568 ENSDART00000075609 N/A N/A N/A 0.476±0.22 N/A N/A 0.771±0.00 1.031±0.00 0.058±0.00 N/A 0.543±0.00 N/A N/A N/A
ENSDART00000142033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140368 ENST00000379595 N/A 1.922±0.00 N/A N/A N/A N/A N/A N/A 0.226±0.00 1.443±0.00 0.099±0.00 N/A 1.648±0.57 N/A
ENST00000557995 1.359±0.00 4.488±0.00 N/A 0.432±0.00 2.421±0.00 0.318±0.00 0.441±0.00 0.577±0.14 N/A 2.147±0.00 N/A 2.180±0.63 1.741±0.01 0.244±0.00
ENST00000558012 N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A N/A N/A N/A 1.103±0.00 N/A
ENST00000558407 N/A N/A N/A N/A 0.533±0.00 N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A
ENST00000558870 N/A N/A N/A 0.164±0.00 N/A N/A N/A 0.704±0.00 0.446±0.00 4.017±0.00 0.289±0.00 N/A N/A 1.306±0.00
ENST00000559161 1.942±0.00 N/A N/A N/A 1.388±0.00 N/A N/A N/A N/A 2.271±1.71 N/A N/A N/A 1.253±0.00
ENST00000559295 N/A N/A N/A N/A N/A 0.874±0.00 N/A N/A 0.298±0.00 N/A N/A 1.936±0.00 1.142±0.00 N/A
ENST00000559750 N/A 2.116±0.00 N/A N/A N/A N/A 0.243±0.00 0.285±0.04 N/A 1.650±0.00 N/A 0.214±0.00 N/A 0.239±0.00
ENST00000559785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.109±0.00 N/A
ENST00000559795 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.771±0.00 N/A N/A N/A N/A
ENST00000559856 1.391±0.00 N/A N/A N/A N/A N/A N/A 0.847±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.757±0.47 3.057±1.33 N/A 0.739±0.00
ENST00000560223 N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A
ENST00000560377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A 0.118±0.00
ENST00000560621 N/A N/A 0.804±0.00 N/A N/A N/A N/A N/A 0.263±0.00 N/A 1.125±0.00 0.368±0.00 N/A N/A
ENST00000560796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561315 N/A N/A N/A 0.835±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140391 ENST00000267970 N/A N/A 0.814±0.00 N/A 7.410±6.30 2.093±0.00 0.403±0.00 N/A 0.980±0.00 1.866±0.00 2.049±0.00 N/A N/A N/A
ENST00000346495 28.922±0.00 49.517±0.00 9.672±0.00 54.600±16.57 56.949±51.43 29.512±9.07 9.855±6.83 40.362±34.92 8.019±0.54 32.216±22.12 22.730±10.29 22.342±5.34 16.225±4.35 46.964±0.00
ENST00000424443 35.204±0.00 53.630±0.00 N/A 59.906±0.00 91.688±0.00 36.150±0.00 N/A 39.799±0.00 4.112±0.00 N/A N/A 64.397±30.06 25.646±17.55 36.572±11.43
ENST00000558394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558745 20.455±0.00 N/A N/A 49.565±0.00 N/A N/A 11.622±0.00 N/A 5.779±0.00 43.386±0.00 23.654±0.00 N/A N/A N/A
ENST00000559373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561277 N/A N/A 4.475±0.00 41.431±0.00 21.634±0.00 26.227±0.00 11.760±5.84 18.826±15.04 9.446±2.83 26.429±14.65 20.944±2.64 79.804±45.83 48.510±7.16 40.717±25.22
ENSG00000269951 ENST00000602975 0.118±0.00 0.519±0.00 1.594±0.00 0.740±0.04 1.936±1.03 4.552±4.20 0.288±0.01 0.125±0.00 1.315±0.00 1.972±1.58 1.665±0.00 2.003±1.88 0.142±0.07 1.042±0.71
ENSG00000278991 ENST00000624777 0.219±0.00 0.448±0.00 0.955±0.00 0.724±0.28 1.366±0.96 1.566±1.48 0.237±0.11 0.317±0.29 0.473±0.45 0.926±0.81 0.027±0.00 0.742±1.02 0.020±0.00 0.137±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032322 ENSMUST00000059206 1.532±0.26 0.578±0.33 2.552±0.18 0.290±0.15 7.429±3.50 1.729±0.67 0.687±0.45 0.289±0.11 2.113±2.02 3.616±0.20 0.326±0.23 1.747±0.50 29.768±25.01 2.427±2.22
ENSMUST00000132800 N/A 0.639±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.076±0.00 N/A N/A
ENSMUST00000135103 N/A N/A N/A 0.154±0.00 N/A N/A 0.331±0.00 0.273±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000138646 0.452±0.08 0.187±0.00 0.624±0.00 0.210±0.13 1.113±0.13 N/A 0.133±0.00 0.147±0.03 0.609±0.26 0.909±0.33 0.110±0.06 0.331±0.15 2.205±0.90 N/A
ENSMUST00000142894 N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A 0.176±0.06 N/A N/A N/A N/A N/A
ENSMUST00000144638 N/A N/A N/A 2.481±0.00 N/A N/A N/A N/A N/A N/A N/A 4.767±0.00 89.834±27.90 5.980±0.00
ENSMUST00000147360 0.565±0.00 0.157±0.00 N/A N/A N/A 0.450±0.01 N/A 0.395±0.00 0.321±0.25 N/A 0.096±0.01 0.295±0.08 N/A N/A
ENSMUSG00000032324 ENSMUST00000034876 136.409±5.44 139.260±21.95 77.370±9.47 122.219±31.57 123.450±10.16 333.210±47.90 114.013±18.57 168.834±6.86 8.956±5.86 66.584±3.82 44.457±4.21 132.986±51.21 38.457±8.90 31.290±10.20

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