C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipid scramblase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354952 PLSCR4-001 ENSG00000114698 9606 - 3:146192339-146251179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354952
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354952 14.455±0.00 2.203±0.00 3.366±0.65 2.891±0.54 5.656±2.90 1.585±0.00 1.943±0.00 7.168±0.00 3.554±0.00 1.356±0.00 4.848±3.08 2.625±0.64 6.865±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065H CIL_00065H_0003 CGP 3:146192339-146495991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 NAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0017121 NAS phospholipid scrambling
GO:0017124 IEA SH3 domain binding
GO:0017128 NAS phospholipid scramblase activity
GO:0019899 IPI enzyme binding
GO:0042609 IPI CD4 receptor binding
GO:0070062 IDA extracellular vesicular exosome
GO:0071222 IEA cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034941 Plscr4-001 protein_coding Mus_musculus 0 952
ENSMUST00000143866 Plscr4-002 retained_intron Mus_musculus 0 606

Loading