C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vasoactive intestinal peptide receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035115 Vipr1-001 ENSMUSG00000032528 10090 + 9:121642716-121672954 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035115 0.552±0.14 0.193±0.07 1.002±0.24 0.820±0.97 4.741±1.73 58.038±3.42 0.158±0.04 0.685±0.09 4.196±3.96 0.719±0.30 0.543±0.11 0.816±0.14 0.042±0.01 0.171±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RR CIL_0007RR_0002 VISTA 9:121055298-121657466
CIL_00047X CIL_00047X_0002 CGP 9:121577843-121672954
CIL_000480 CIL_000480_0002 CGP 9:121642716-121705490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004999 IEA vasoactive intestinal polypeptide receptor activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0043235 ISO receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262178 VIPR2-001 protein_coding Homo_sapiens 9e-19 100
ENST00000325123 VIPR1-001 protein_coding Homo_sapiens 0 1491
ENST00000377633 VIPR2-003 protein_coding Homo_sapiens 3e-19 100
ENST00000402066 VIPR2-002 protein_coding Homo_sapiens 4e-19 100
ENST00000433647 VIPR1-002 protein_coding Homo_sapiens 0 1384
ENST00000436487 VIPR1-012 nonsense_mediated_decay Homo_sapiens 0 839
ENST00000438259 VIPR1-201 protein_coding Homo_sapiens 0 774
ENST00000439731 VIPR1-013 protein_coding Homo_sapiens 0 466
ENST00000439910 VIPR1-004 nonsense_mediated_decay Homo_sapiens 0 774
ENST00000443646 VIPR1-003 nonsense_mediated_decay Homo_sapiens 0 1304
ENST00000446673 VIPR1-014 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000450274 VIPR1-011 protein_coding Homo_sapiens 0 357
ENST00000465338 VIPR1-017 retained_intron Homo_sapiens 0 252
ENST00000473575 VIPR1-015 processed_transcript Homo_sapiens 0 339
ENST00000487545 VIPR1-010 processed_transcript Homo_sapiens 0 196
ENST00000543411 VIPR1-202 protein_coding Homo_sapiens 0 1295

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