C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035604 Gemin5-001 ENSMUSG00000037275 10090 - 11:58121290-58168539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035604
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035604 1.857±0.80 3.110±1.44 0.797±0.00 1.881±0.84 1.770±1.03 0.816±0.30 0.986±0.33 1.293±1.03 1.860±0.70 0.894±0.51 7.070±3.57 3.093±2.33 7.649±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099I CIL_00099I_0002 VISTA 11:57547462-58147793
CIL_00088D CIL_00088D_0002 VISTA 11:57627590-58231336
CIL_00023V CIL_00023V_0002 CGP 11:58104153-58168539
CIL_00023Y CIL_00023Y_0002 CGP 11:58120002-58179565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000387 ISS spliceosomal snRNP assembly
GO:0005829 ISS cytosol
GO:0017069 ISS snRNA binding
GO:0032797 ISS SMN complex
GO:0034719 ISS SMN-Sm protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285873 GEMIN5-001 protein_coding Homo_sapiens 0 3687

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