C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRICK1, SCAR/WAVE actin-nucleating complex subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035725 Brk1-201 ENSMUSG00000033940 10090 + 6:113604772-113616948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035725
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035725 107.141±8.16 133.949±19.55 90.629±11.63 63.497±30.69 118.757±28.02 66.903±7.94 63.173±2.70 101.985±8.25 62.063±12.97 96.161±13.20 31.516±2.37 73.345±16.84 56.160±27.39 38.918±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059J CIL_00059J_0002 CGP 6:113596761-113616948
CIL_00061Q CIL_00061Q_0002 CGP 6:113604772-113631633

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005856 IEA cytoskeleton
GO:0008284 IMP positive regulation of cell proliferation
GO:0010592 IEA positive regulation of lamellipodium assembly
GO:0016601 IEA Rac protein signal transduction
GO:0030027 IDA lamellipodium
GO:0030036 IMP actin cytoskeleton organization
GO:0031209 IEA SCAR complex
GO:0032403 IEA protein complex binding
GO:0048365 IEA Rac GTPase binding
GO:0048870 IMP cell motility
GO:0070062 IEA extracellular vesicular exosome
GO:0070207 IEA protein homotrimerization
GO:2000601 IEA positive regulation of Arp2/3 complex-mediated actin nucleation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000530758 BRK1-001 protein_coding Homo_sapiens 0 765

Loading