C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: early growth response 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035908 Egr3-201 ENSMUSG00000033730 10090 + 14:70077445-70080157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035908
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035908 0.411±0.07 0.284±0.06 0.179±0.00 0.324±0.09 3.529±2.00 0.411±0.12 0.251±0.02 0.220±0.18 0.031±0.02 0.225±0.03 0.165±0.10 1.681±0.97 0.253±0.17 10.419±4.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038L CIL_00038L_0002 CGP 14:69840420-70080157
CIL_0000U4 CIL_0000U4_0002 CGP 14:70077445-70138191

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001938 IEA positive regulation of endothelial cell proliferation
GO:0002042 IEA cell migration involved in sprouting angiogenesis
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007274 IMP neuromuscular synaptic transmission
GO:0007422 IMP peripheral nervous system development
GO:0033089 IMP positive regulation of T cell differentiation in thymus
GO:0035767 IEA endothelial cell chemotaxis
GO:0035924 IEA cellular response to vascular endothelial growth factor stimulus
GO:0043066 IBA negative regulation of apoptotic process
GO:0044344 IEA cellular response to fibroblast growth factor stimulus
GO:0045586 IDA regulation of gamma-delta T cell differentiation
GO:0046872 IEA metal ion binding
GO:0071320 IBA cellular response to cAMP
GO:0071371 IBA cellular response to gonadotropin stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110381 EGR4 (1 of 2)-001 protein_coding Danio_rerio 4.99983e-42 176
ENST00000242480 EGR2-001 protein_coding Homo_sapiens 0 303
ENST00000317216 EGR3-001 protein_coding Homo_sapiens 0 2041
ENST00000411732 EGR2-201 protein_coding Homo_sapiens 0 303
ENST00000439032 EGR2-202 protein_coding Homo_sapiens 0 303
ENST00000518773 EGR3-005 processed_transcript Homo_sapiens 0 468
ENST00000519492 EGR3-002 protein_coding Homo_sapiens 0 1578
ENST00000522910 EGR3-003 protein_coding Homo_sapiens 0 1777
ENST00000524088 EGR3-004 processed_transcript Homo_sapiens 0 1522

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