C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: early growth response 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317216 EGR3-001 ENSG00000179388 9606 - 8:22687659-22693302 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000317216
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000317216 0.857±0.00 1.134±0.00 0.274±0.00 2.627±1.42 2.369±0.85 0.335±0.00 0.263±0.00 1.028±0.87 0.086±0.00 10.695±15.90 0.777±0.14 0.653±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001938 IMP positive regulation of endothelial cell proliferation
GO:0002042 IDA cell migration involved in sprouting angiogenesis
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007274 IEA neuromuscular synaptic transmission
GO:0007422 IEA peripheral nervous system development
GO:0007517 TAS muscle organ development
GO:0007623 TAS circadian rhythm
GO:0033089 IEA positive regulation of T cell differentiation in thymus
GO:0035767 IMP endothelial cell chemotaxis
GO:0035924 IMP cellular response to vascular endothelial growth factor stimulus
GO:0043066 IMP negative regulation of apoptotic process
GO:0044344 IMP cellular response to fibroblast growth factor stimulus
GO:0045586 IEA regulation of gamma-delta T cell differentiation
GO:0046872 IEA metal ion binding
GO:0071320 IBA cellular response to cAMP
GO:0071371 IBA cellular response to gonadotropin stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035908 Egr3-201 protein_coding Mus_musculus 0 2041
ENSMUST00000127820 Egr2-003 protein_coding Mus_musculus 0 213
ENSMUST00000105438 Egr2-002 protein_coding Mus_musculus 0 213
ENSMUST00000048289 Egr2-001 protein_coding Mus_musculus 0 213
ENSMUST00000095759 Egr4-201 protein_coding Mus_musculus 0 209
ENSDART00000110381 EGR4 (1 of 2)-001 protein_coding Danio_rerio 3.99931e-42 178

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