C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036541 Arl5a-001 ENSMUSG00000036093 10090 - 2:52397951-52424901 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036541
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036541 12.215±1.04 12.158±0.76 14.398±1.55 11.853±4.51 9.141±2.26 14.399±4.08 7.742±0.84 11.362±2.18 18.415±6.74 13.425±0.63 6.944±0.47 12.679±4.66 8.397±2.40 0.868±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RZ CIL_0003RZ_0003 CGP 2:52136647-52424901
CIL_0007E4 CIL_0007E4_0002 CGP 2:52397951-52676831

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295087 ARL5A-001 protein_coding Homo_sapiens 0 1240
ENST00000428992 ARL5A-002 protein_coding Homo_sapiens 0 883
ENST00000430731 ARL5AP4-001 processed_pseudogene Homo_sapiens 0 532
ENST00000444698 ARL5AP2-001 processed_pseudogene Homo_sapiens 0 601
ENST00000446896 ARL5A-004 nonsense_mediated_decay Homo_sapiens 0 891
ENST00000451247 RP3-481A17.1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000458140 ARL5A-003 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000487723 ARL5A-007 processed_transcript Homo_sapiens 0 268
ENST00000552554 PGAM1P5-002 processed_transcript Homo_sapiens 0.00000002 66

Loading