C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036584 Pank1-201 ENSMUSG00000033610 10090 - 19:34810894-34879455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036584
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036584 0.998±0.47 5.748±3.75 0.361±0.02 1.345±0.56 0.551±0.26 1.646±0.80 2.856±0.34 5.062±1.38 0.986±0.50 0.956±0.50 2.341±0.57 6.333±4.37 0.244±0.12 1.922±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V5 CIL_0001V5_0002 CGP 19:34668403-34879455
CIL_0001IR CIL_0001IR_0002 CGP 19:34810894-34975731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IDA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0015937 IEA coenzyme A biosynthetic process
GO:0016310 IEA phosphorylation
GO:0030118 IDA clathrin coat
GO:0055037 IDA recycling endosome
GO:0071944 IDA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307534 PANK1-201 protein_coding Homo_sapiens 0 1982
ENST00000322191 PANK1-002 protein_coding Homo_sapiens 0 776
ENST00000342512 PANK1-001 protein_coding Homo_sapiens 0 1832
ENST00000461829 PANK1-004 processed_transcript Homo_sapiens 0 614
ENST00000507624 RP11-80H5.5-001 processed_pseudogene Homo_sapiens 0 198

Loading