C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307534 PANK1-201 ENSG00000152782 9606 - 10:89579497-89645572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaENST00000307534
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENST00000307534 0.938±0.00 0.416±0.00 0.079±0.00 0.236±0.00 0.235±0.00 0.438±0.00 0.083±0.00 0.045±0.00 0.062±0.00 0.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V5 CIL_0001V5_0001 CGP 10:89430299-89645572
CIL_0001IR CIL_0001IR_0001 CGP 10:89579497-89774939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0009108 TAS coenzyme biosynthetic process
GO:0015937 IEA coenzyme A biosynthetic process
GO:0015939 TAS pantothenate metabolic process
GO:0016310 IEA phosphorylation
GO:0030118 IEA clathrin coat
GO:0044281 TAS small molecule metabolic process
GO:0055037 IEA recycling endosome
GO:0071944 IEA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036584 Pank1-201 protein_coding Mus_musculus 0 1982
ENSMUST00000112460 Pank1-202 protein_coding Mus_musculus 0 1832
ENSDART00000127583 pank1a-202 protein_coding Danio_rerio 0 680
ENSDART00000104724 pank1a-201 protein_coding Danio_rerio 0 651
ENSDART00000146787 pank1a-001 protein_coding Danio_rerio 0 651
ENSMUST00000150843 Pank2-001 protein_coding Mus_musculus 0 451
ENSMUST00000138509 Pank2-005 processed_transcript Mus_musculus 0 448
ENSDART00000135814 pank1a-002 protein_coding Danio_rerio 0 399
ENSMUST00000184105 Pank2-003 nonsense_mediated_decay Mus_musculus 0 309
ENSDART00000143508 pank1a-003 processed_transcript Danio_rerio 0 274
ENSMUST00000183349 Pank2-008 nonsense_mediated_decay Mus_musculus 7e-37 161
ENSMUST00000184932 Pank2-004 nonsense_mediated_decay Mus_musculus 7e-37 161
ENSMUST00000183388 Pank2-006 nonsense_mediated_decay Mus_musculus 3e-16 94

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