C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342512 PANK1-001 ENSG00000152782 9606 - 10:89582988-89643887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342512
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342512 0.322±0.00 3.536±0.00 1.056±0.00 0.711±0.02 1.742±0.82 3.525±2.58 8.412±1.36 10.688±0.00 0.497±0.00 1.219±0.52 3.107±2.60 1.585±0.85 2.561±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V5 CIL_0001V5_0001 CGP 10:89430299-89645572
CIL_0001IR CIL_0001IR_0001 CGP 10:89579497-89774939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0009108 TAS coenzyme biosynthetic process
GO:0015937 IEA coenzyme A biosynthetic process
GO:0015939 TAS pantothenate metabolic process
GO:0016310 IEA phosphorylation
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112460 Pank1-202 protein_coding Mus_musculus 0 1930
ENSMUST00000036584 Pank1-201 protein_coding Mus_musculus 0 1832
ENSDART00000104724 pank1a-201 protein_coding Danio_rerio 0 652
ENSDART00000146787 pank1a-001 protein_coding Danio_rerio 0 652
ENSDART00000127583 pank1a-202 protein_coding Danio_rerio 0 651
ENSMUST00000138509 Pank2-005 processed_transcript Mus_musculus 0 448
ENSMUST00000150843 Pank2-001 protein_coding Mus_musculus 0 448
ENSDART00000135814 pank1a-002 protein_coding Danio_rerio 0 370
ENSMUST00000184105 Pank2-003 nonsense_mediated_decay Mus_musculus 0 309
ENSDART00000143508 pank1a-003 processed_transcript Danio_rerio 0 276
ENSMUST00000183349 Pank2-008 nonsense_mediated_decay Mus_musculus 3e-37 161
ENSMUST00000184932 Pank2-004 nonsense_mediated_decay Mus_musculus 3e-37 161
ENSMUST00000183388 Pank2-006 nonsense_mediated_decay Mus_musculus 1e-16 94

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