C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 1, member a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037481 Clec1a-201 ENSMUSG00000033082 10090 - 6:129426684-129452000 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037481
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037481 1.494±0.53 2.141±0.40 0.428±0.10 0.212±0.03 1.976±0.27 0.761±0.28 1.790±0.38 1.752±0.12 0.261±0.14 26.326±4.89 0.376±0.09 5.452±2.25 2.609±2.01 0.014±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TD CIL_0000TD_0002 CGP 6:129408862-129452000
CIL_0000TC CIL_0000TC_0002 CGP 6:129426684-129472777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315330 CLEC1A-001 protein_coding Homo_sapiens 0 501
ENST00000420265 CLEC1A-004 protein_coding Homo_sapiens 0 283
ENST00000457018 CLEC1A-003 protein_coding Homo_sapiens 0 335

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