C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150048-ENSG00000172243 CGP 9606 12:10069554-10130258
GeneTranscriptPositionBiotype
ENSG00000150048 (CLEC1A)
C-type lectin domain family 1, member A 		ENST00000315330 (CLEC1A-001) 10069554-10098985 protein_coding
ENST00000414501 (CLEC1A-002) 10089127-10111627 protein_coding
ENST00000420265 (CLEC1A-004) 10070763-10098950 protein_coding
ENST00000457018 (CLEC1A-003) 10070483-10099014 protein_coding
ENST00000544104 (CLEC1A-006) 10081269-10099028 nonsense_mediated_decay
ENSG00000172243 (CLEC7A)
C-type lectin domain family 7, member A 		ENST00000298523 (CLEC7A-012) 10117862-10130153 protein_coding
ENST00000304084 (CLEC7A-013) 10118227-10130237 protein_coding
ENST00000310002 (CLEC7A-003) 10127327-10130189 protein_coding
ENST00000349926 (CLEC7A-008) 10118458-10130082 nonsense_mediated_decay
ENST00000353231 (CLEC7A-001) 10116777-10130241 protein_coding
ENST00000396484 (CLEC7A-004) 10118068-10130185 protein_coding
ENST00000465100 (CLEC7A-002) 10118458-10130082 nonsense_mediated_decay
ENST00000525605 (CLEC7A-014) 10127446-10130257 protein_coding
ENST00000528799 (CLEC7A-011) 10124746-10130183 retained_intron
ENST00000529761 (CLEC7A-007) 10116777-10130258 nonsense_mediated_decay
ENST00000531192 (CLEC7A-006) 10118549-10130257 nonsense_mediated_decay
ENST00000533022 (CLEC7A-009) 10118458-10130082 protein_coding
ENST00000534609 (CLEC7A-005) 10116777-10130257 retained_intron
ENSG00000223042 (RN7SKP161)
RNA, 7SK small nuclear pseudogene 161 		ENST00000411110 (RN7SKP161-201) 10084186-10084490 misc_RNA
ENSG00000255734 (HNRNPABP1)
heterogeneous nuclear ribonucleoprotein A/B pseudogene 1 		ENST00000406003 (HNRNPABP1-001) 10111738-10112471 processed_pseudogene
CIL_0000TC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033082-ENSMUSG00000079293 CGP 10090 6:129426684-129472777
GeneTranscriptPositionBiotype
ENSMUSG00000033082 (Clec1a)
C-type lectin domain family 1, member a 		ENSMUST00000037481 (Clec1a-201) 129426684-129452000 protein_coding
ENSMUSG00000079293 (Clec7a)
C-type lectin domain family 7, member a 		ENSMUST00000112076 (Clec7a-201) 129461591-129472777 protein_coding
ENSMUST00000184581 (Clec7a-002) 129463026-129472777 protein_coding
ENSMUSG00000102040 (Clec7a)
C-type lectin domain family 7, member a 		ENSMUST00000184861 (Clec7a-202) 129463041-129472685 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TC_0001ENSG00000150048ENST00000315330ENST00000414501ENST00000420265ENST00000457018ENST00000544104ENSG00000172243ENST00000298523ENST00000304084ENST00000310002ENST00000349926ENST00000353231ENST00000396484ENST00000465100ENST00000525605ENST00000528799ENST00000529761ENST00000531192ENST00000533022ENST00000534609ENSG00000223042ENST00000411110ENSG00000255734ENST00000406003CIL_0000TC_0002ENSMUSG00000033082ENSMUST00000037481ENSMUSG00000079293ENSMUST00000112076ENSMUST00000184581ENSMUSG00000102040ENSMUST00000184861
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TC_0001ENSG00000150048ENST00000315330ENST00000420265ENST00000457018ENST00000544104ENSG00000172243ENST00000298523ENST00000304084ENST00000310002ENST00000353231ENST00000396484ENST00000528799ENST00000534609ENSG00000223042ENST00000411110ENSG00000255734ENST00000406003CIL_0000TC_0002ENSMUSG00000033082ENSMUST00000037481ENSMUSG00000079293ENSMUST00000112076ENSMUST00000184581ENSMUSG00000102040ENSMUST00000184861
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150048 ENST00000315330 N/A N/A 0.167±0.00 0.132±0.00 N/A 0.046±0.00 N/A 0.170±0.00 0.631±0.00 N/A N/A 0.538±0.00 4.360±0.38 0.203±0.00
ENST00000414501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420265 N/A N/A N/A 0.240±0.00 N/A N/A 0.559±0.30 0.935±0.67 0.179±0.00 N/A N/A 0.922±0.00 30.031±0.00 1.685±0.95
ENST00000457018 2.645±0.00 3.772±0.00 N/A 0.330±0.00 2.195±1.02 4.431±0.00 0.794±0.00 0.940±0.00 1.172±0.00 25.005±0.00 1.181±0.00 1.242±0.98 21.626±4.96 1.416±0.46
ENST00000544104 N/A N/A N/A 0.645±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172243 ENST00000298523 1.849±0.00 N/A N/A 0.656±0.15 1.508±0.00 0.745±0.00 N/A 2.380±0.00 N/A N/A 0.025±0.00 0.540±0.00 N/A N/A
ENST00000304084 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.213±0.00 N/A N/A N/A N/A
ENST00000310002 N/A N/A N/A N/A 4.803±0.00 N/A N/A N/A N/A N/A N/A N/A 3.683±0.00 N/A
ENST00000349926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000353231 1.049±0.00 2.009±0.00 0.105±0.00 N/A 1.337±0.00 0.191±0.00 0.374±0.00 1.272±0.00 0.639±0.00 2.193±0.13 0.056±0.02 0.487±0.22 1.630±0.52 0.754±0.00
ENST00000396484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.904±0.06 N/A N/A
ENST00000465100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528799 N/A N/A 0.459±0.00 N/A 1.894±0.00 1.455±0.00 N/A N/A N/A 4.500±0.00 N/A N/A N/A N/A
ENST00000529761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534609 0.625±0.00 N/A 0.073±0.00 0.380±0.00 N/A 0.840±0.00 N/A N/A 0.059±0.00 3.320±0.00 N/A 0.216±0.01 N/A 0.215±0.11
ENSG00000223042 ENST00000411110 N/A N/A N/A N/A 0.155±0.09 N/A N/A N/A N/A 0.699±0.41 N/A 0.943±0.00 N/A 0.420±0.00
ENSG00000255734 ENST00000406003 N/A 0.021±0.00 N/A 0.022±0.00 N/A 0.020±0.00 N/A 0.022±0.00 N/A N/A 0.019±0.00 0.063±0.04 0.057±0.00 0.104±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033082 ENSMUST00000037481 1.494±0.53 2.141±0.40 0.428±0.10 0.212±0.03 1.976±0.27 0.761±0.28 1.790±0.38 1.752±0.12 0.261±0.14 26.326±4.89 0.376±0.09 5.452±2.25 2.609±2.01 0.014±0.01
ENSMUSG00000079293 ENSMUST00000112076 N/A 0.232±0.11 0.965±0.00 0.047±0.02 0.507±0.11 0.309±0.08 N/A 0.135±0.00 0.856±0.65 1.325±0.21 0.065±0.01 0.483±0.20 1.521±0.89 0.024±0.01
ENSMUST00000184581 1.125±0.14 0.526±0.00 N/A N/A 1.191±0.34 0.212±0.00 0.359±0.06 0.303±0.03 1.090±0.52 3.901±0.27 N/A 0.874±0.61 0.450±0.01 0.049±0.00
ENSMUSG00000102040 ENSMUST00000184861 N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A 0.533±0.00 N/A

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