C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003SA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124785-ENSG00000124491 CGP 9606 6:5997999-6321013
GeneTranscriptPositionBiotype
ENSG00000124491 (F13A1)
coagulation factor XIII, A1 polypeptide 		ENST00000264870 (F13A1-001) 6144085-6320834 protein_coding
ENST00000414279 (F13A1-003) 6266713-6321013 protein_coding
ENST00000431222 (F13A1-004) 6266734-6320905 protein_coding
ENST00000445223 (F13A1-002) 6206411-6224808 protein_coding
ENST00000451619 (F13A1-006) 6305113-6320642 protein_coding
ENST00000479211 (F13A1-005) 6250907-6305654 retained_intron
ENSG00000124785 (NRN1)
neuritin 1 		ENST00000244766 (NRN1-001) 5997999-6006967 protein_coding
ENST00000495850 (NRN1-002) 5998715-6002963 processed_transcript
ENST00000616243 (NRN1-201) 5998002-6007605 protein_coding
ENST00000622188 (NRN1-202) 5998002-6004044 protein_coding
ENSG00000263572 (MIR7853)
microRNA 5683 		ENST00000584820 (MIR7853-201) 6169304-6169435 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003SA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039114-ENSMUSG00000039109 CGP 10090 13:36725625-37050244
GeneTranscriptPositionBiotype
ENSMUSG00000039109 (F13a1)
coagulation factor XIII, A1 subunit 		ENSMUST00000037491 (F13a1-201) 36867178-37049213 protein_coding
ENSMUST00000164727 (F13a1-202) 36867178-37050244 protein_coding
ENSMUSG00000039114 (Nrn1)
neuritin 1 		ENSMUST00000037623 (Nrn1-001) 36725625-36734477 protein_coding
ENSMUST00000122286 (Nrn1-002) 36726458-36730668 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SA_0001ENSG00000124491ENST00000264870ENST00000414279ENST00000431222ENST00000445223ENST00000451619ENST00000479211ENSG00000124785ENST00000244766ENST00000495850ENST00000616243ENST00000622188ENSG00000263572ENST00000584820CIL_0003SA_0002ENSMUSG00000039109ENSMUST00000037491ENSMUST00000164727ENSMUSG00000039114ENSMUST00000037623ENSMUST00000122286
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SA_0001ENSG00000124491ENST00000264870ENST00000414279ENSG00000124785ENST00000244766ENST00000495850ENST00000616243ENST00000622188ENSG00000263572ENST00000584820CIL_0003SA_0002ENSMUSG00000039109ENSMUST00000037491ENSMUST00000164727ENSMUSG00000039114ENSMUST00000037623ENSMUST00000122286
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124491 ENST00000264870 N/A N/A N/A N/A 3.437±0.00 1.561±0.00 1.533±0.00 0.059±0.00 3.913±0.00 N/A N/A N/A N/A 0.313±0.00
ENST00000414279 N/A N/A N/A N/A N/A N/A N/A 0.416±0.00 N/A N/A 1.861±0.00 N/A N/A N/A
ENST00000431222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000124785 ENST00000244766 16.809±0.00 12.342±0.00 0.258±0.00 45.074±8.69 10.381±6.01 7.773±7.36 2.861±1.59 0.201±0.06 0.563±0.10 9.145±7.83 4.947±0.00 2.346±1.82 29.397±6.25 1.211±0.59
ENST00000495850 N/A N/A N/A N/A N/A 0.370±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616243 N/A 11.726±0.00 N/A 40.721±0.00 N/A 13.821±0.00 N/A 0.419±0.00 N/A N/A 0.666±0.00 N/A N/A 3.295±0.00
ENST00000622188 8.160±0.00 5.216±0.00 N/A N/A 4.440±0.00 N/A 1.357±0.00 0.661±0.00 0.454±0.00 3.140±0.00 N/A 0.670±0.00 N/A 0.947±0.00
ENSG00000263572 ENST00000584820 N/A N/A N/A N/A 10.965±0.00 26.469±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039109 ENSMUST00000037491 15.921±2.32 1.330±0.20 13.487±0.89 0.873±0.48 21.926±2.32 3.265±0.68 4.701±0.46 0.829±0.15 3.517±2.15 4.422±0.56 1.540±0.50 2.547±0.50 3.454±3.41 0.696±0.25
ENSMUST00000164727 N/A N/A N/A N/A N/A 0.633±0.00 N/A 0.724±0.00 0.019±0.01 N/A 1.191±0.58 N/A 0.775±0.00 0.151±0.00
ENSMUSG00000039114 ENSMUST00000037623 4.473±0.73 0.368±0.18 14.050±0.67 31.818±6.34 1.750±0.43 1.355±0.86 2.592±0.25 0.176±0.05 87.003±49.21 6.128±1.30 0.473±0.16 22.844±21.43 1.930±1.97 0.653±0.43
ENSMUST00000122286 1.438±0.00 0.892±0.49 N/A N/A 1.332±0.63 1.023±0.57 1.148±0.00 0.103±0.01 N/A 1.804±0.00 0.379±0.00 7.257±2.64 0.386±0.01 N/A

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