C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuritin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037623 Nrn1-001 ENSMUSG00000039114 10090 - 13:36725625-36734477 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037623
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037623 4.473±0.73 0.368±0.18 14.050±0.67 31.818±6.34 1.750±0.43 1.355±0.86 2.592±0.25 0.176±0.05 87.003±49.21 6.128±1.30 0.473±0.16 22.844±21.43 1.930±1.97 0.653±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005H CIL_00005H_0002 CGP 13:36117411-36734477
CIL_0003SA CIL_0003SA_0002 CGP 13:36725625-37050244

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007409 ISO axonogenesis
GO:0030054 IEA cell junction
GO:0031225 IEA anchored component of membrane
GO:0032281 IDA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244766 NRN1-001 protein_coding Homo_sapiens 0 1884
ENST00000495850 NRN1-002 processed_transcript Homo_sapiens 0 780
ENST00000616243 NRN1-201 protein_coding Homo_sapiens 0 1616
ENST00000622188 NRN1-202 protein_coding Homo_sapiens 0 1452

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