C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fer (fms/fps related) protein kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038080 Fer-202 ENSMUSG00000000127 10090 + 17:63937972-64139494 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverLungOvaryTestisENSMUST00000038080
Transcript ID Adrenal Colon Kidney Liver Lung Ovary Testis
ENSMUST00000038080 0.332±0.06 0.260±0.00 0.543±0.00 0.358±0.13 0.588±0.00 0.638±0.06 4.156±1.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075K CIL_00075K_0002 CGP 17:63896018-64331916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 ISS microtubule cytoskeleton organization
GO:0000790 ISS nuclear chromatin
GO:0001932 IMP regulation of protein phosphorylation
GO:0004672 IDA protein kinase activity
GO:0004715 ISS non-membrane spanning protein tyrosine kinase activity
GO:0005154 ISS epidermal growth factor receptor binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0006468 IDA protein phosphorylation
GO:0006935 IMP chemotaxis
GO:0007155 IMP cell adhesion
GO:0007165 IDA signal transduction
GO:0008157 IPI protein phosphatase 1 binding
GO:0008289 ISS lipid binding
GO:0010591 ISS regulation of lamellipodium assembly
GO:0010762 IMP regulation of fibroblast migration
GO:0015629 ISS actin cytoskeleton
GO:0015630 ISS microtubule cytoskeleton
GO:0018108 ISS peptidyl-tyrosine phosphorylation
GO:0019221 ISS cytokine-mediated signaling pathway
GO:0030027 ISS lamellipodium
GO:0030054 ISS cell junction
GO:0030335 ISS positive regulation of cell migration
GO:0030838 ISS positive regulation of actin filament polymerization
GO:0031234 ISS extrinsic component of cytoplasmic side of plasma membrane
GO:0031532 IMP actin cytoskeleton reorganization
GO:0032496 IMP response to lipopolysaccharide
GO:0032869 IDA cellular response to insulin stimulus
GO:0033007 IMP negative regulation of mast cell activation involved in immune response
GO:0034446 IMP substrate adhesion-dependent cell spreading
GO:0034614 IMP cellular response to reactive oxygen species
GO:0035426 IMP extracellular matrix-cell signaling
GO:0036119 IDA response to platelet-derived growth factor
GO:0038028 IDA insulin receptor signaling pathway via phosphatidylinositol 3-kinase
GO:0038095 IMP Fc-epsilon receptor signaling pathway
GO:0038109 IMP Kit signaling pathway
GO:0042058 ISS regulation of epidermal growth factor receptor signaling pathway
GO:0044331 IMP cell-cell adhesion mediated by cadherin
GO:0046777 IDA protein autophosphorylation
GO:0048008 IDA platelet-derived growth factor receptor signaling pathway
GO:0050904 IMP diapedesis
GO:0051092 ISS positive regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281092 FER-001 protein_coding Homo_sapiens 0 1465
ENST00000432353 THOC2-010 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000436391 FERP1-001 processed_pseudogene Homo_sapiens 0 544
ENST00000438717 FER-201 protein_coding Homo_sapiens 0 1410
ENST00000441692 THOC2-009 protein_coding Homo_sapiens 0 427
ENST00000455053 THOC2-013 protein_coding Homo_sapiens 0 296
ENST00000504143 FER-008 nonsense_mediated_decay Homo_sapiens 0 1465
ENST00000505323 FER-006 processed_transcript Homo_sapiens 0 652
ENST00000513777 FER-007 processed_transcript Homo_sapiens 0 545
ENST00000618150 THOC2-202 protein_coding Homo_sapiens 0 427
ENST00000618353 FER-202 protein_coding Homo_sapiens 0 1439

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