C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-stimulated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038142 Isg20-001 ENSMUSG00000039236 10090 + 7:78913765-78920362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038142 8.634±0.35 0.997±0.40 17.404±1.35 0.223±0.00 3.957±2.60 9.325±2.22 5.725±4.04 2.391±0.50 11.932±10.47 17.124±0.66 0.573±0.08 14.679±4.90 75.520±25.66 14.822±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011F CIL_00011F_0002 CGP 7:78895854-78920362
CIL_00011K CIL_00011K_0002 CGP 7:78913424-79115099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004527 ISS exonuclease activity
GO:0005634 ISS nucleus
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006364 IEA rRNA processing
GO:0008859 IEA exoribonuclease II activity
GO:0015030 ISS Cajal body
GO:0030619 ISS U1 snRNA binding
GO:0030620 ISS U2 snRNA binding
GO:0034511 ISS U3 snoRNA binding
GO:0045087 IEA innate immune response
GO:0046872 IEA metal ion binding
GO:0051607 ISS defense response to virus
GO:0090503 IEA RNA phosphodiester bond hydrolysis, exonucleolytic

Homologs

No Homologs available.

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