C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00011K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172183-ENSG00000157766 CGP 9606 15:88636153-88875354
GeneTranscriptPositionBiotype
ENSG00000157766 (ACAN)
aggrecan 		ENST00000352105 (ACAN-004) 88803759-88874653 protein_coding
ENST00000439576 (ACAN-201) 88803443-88875354 protein_coding
ENST00000558207 (ACAN-001) 88803474-88851521 protein_coding
ENST00000558604 (ACAN-002) 88873713-88874841 retained_intron
ENST00000558704 (ACAN-003) 88872969-88874841 protein_coding
ENST00000559004 (ACAN-008) 88803759-88874572 protein_coding
ENST00000560601 (ACAN-005) 88859076-88871490 protein_coding
ENST00000561243 (ACAN-006) 88836207-88874481 protein_coding
ENST00000617301 (ACAN-202) 88803443-88875354 protein_coding
ENSG00000172183 (ISG20)
interferon stimulated exonuclease gene 20kDa 		ENST00000306072 (ISG20-001) 88638743-88656483 protein_coding
ENST00000379224 (ISG20-008) 88638941-88650386 protein_coding
ENST00000546338 (ISG20-007) 88652036-88655625 retained_intron
ENST00000557824 (ISG20-002) 88646912-88655649 retained_intron
ENST00000558236 (ISG20-011) 88647820-88652186 processed_transcript
ENST00000558942 (ISG20-003) 88638963-88655616 retained_intron
ENST00000558992 (ISG20-010) 88636170-88637428 processed_transcript
ENST00000559876 (ISG20-006) 88638953-88655511 protein_coding
ENST00000560573 (ISG20-004) 88639043-88655648 retained_intron
ENST00000560741 (ISG20-009) 88636153-88655621 protein_coding
ENST00000560746 (ISG20-005) 88650253-88655650 processed_transcript
ENSG00000259676 (RP11-343B18.2)
 ENST00000561358 (RP11-343B18.2-001) 88797413-88798734 lincRNA
CIL_00011K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039236-ENSMUSG00000030607 CGP 10090 7:78913424-79115099
GeneTranscriptPositionBiotype
ENSMUSG00000030607 (Acan)
aggrecan 		ENSMUST00000032835 (Acan-201) 79053483-79115099 protein_coding
ENSMUSG00000039236 (Isg20)
interferon-stimulated protein 		ENSMUST00000038142 (Isg20-001) 78913765-78920362 protein_coding
ENSMUST00000118867 (Isg20-003) 78913424-78920212 protein_coding
ENSMUST00000120331 (Isg20-004) 78914235-78920349 protein_coding
ENSMUST00000121645 (Isg20-002) 78913458-78920307 protein_coding
ENSMUST00000133042 (Isg20-005) 78913981-78917018 retained_intron
ENSMUSG00000097441 (Gm26633)
predicted gene, 26633 		ENSMUST00000180546 (Gm26633-201) 79018053-79053323 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011K_0001ENSG00000157766ENST00000352105ENST00000439576ENST00000558207ENST00000558604ENST00000558704ENST00000559004ENST00000560601ENST00000561243ENST00000617301ENSG00000172183ENST00000306072ENST00000379224ENST00000546338ENST00000557824ENST00000558236ENST00000558942ENST00000558992ENST00000559876ENST00000560573ENST00000560741ENST00000560746ENSG00000259676ENST00000561358CIL_00011K_0002ENSMUSG00000030607ENSMUST00000032835ENSMUSG00000039236ENSMUST00000038142ENSMUST00000118867ENSMUST00000120331ENSMUST00000121645ENSMUST00000133042ENSMUSG00000097441ENSMUST00000180546
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011K_0001ENSG00000157766ENST00000352105ENST00000439576ENST00000558207ENST00000558604ENST00000558704ENST00000559004ENST00000561243ENST00000617301ENSG00000172183ENST00000306072ENST00000379224ENST00000546338ENST00000557824ENST00000558942ENST00000559876ENST00000560573ENST00000560741ENSG00000259676ENST00000561358CIL_00011K_0002ENSMUSG00000030607ENSMUST00000032835ENSMUSG00000039236ENSMUST00000038142ENSMUST00000118867ENSMUST00000120331ENSMUST00000121645ENSMUST00000133042ENSMUSG00000097441ENSMUST00000180546
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157766 ENST00000352105 N/A N/A N/A N/A 0.186±0.00 N/A 0.005±0.00 N/A N/A N/A 0.061±0.00 0.324±0.00 N/A N/A
ENST00000439576 N/A 0.189±0.00 N/A N/A N/A N/A N/A N/A N/A 0.472±0.00 N/A N/A 0.092±0.00 N/A
ENST00000558207 0.073±0.00 N/A N/A 0.133±0.00 0.041±0.00 0.063±0.00 0.075±0.00 N/A 0.031±0.00 N/A 0.098±0.06 N/A N/A N/A
ENST00000558604 N/A N/A N/A N/A 0.147±0.00 0.130±0.00 N/A 0.195±0.00 0.921±0.00 N/A N/A 1.406±0.00 1.090±0.00 N/A
ENST00000558704 N/A 1.700±0.00 1.014±0.00 0.474±0.00 N/A 0.467±0.00 N/A 0.214±0.00 N/A 3.909±0.00 0.364±0.00 N/A N/A 3.551±0.00
ENST00000559004 N/A N/A N/A N/A 0.068±0.00 N/A 0.001±0.00 N/A N/A N/A 0.071±0.00 N/A 0.200±0.00 N/A
ENST00000560601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561243 0.040±0.00 N/A N/A 0.051±0.00 N/A N/A 0.002±0.00 N/A N/A 0.405±0.00 0.117±0.00 0.088±0.00 0.099±0.00 N/A
ENST00000617301 0.042±0.00 0.558±0.00 0.110±0.00 0.191±0.00 0.019±0.00 0.175±0.00 N/A 1.261±0.00 0.186±0.00 0.677±0.00 N/A 0.732±0.40 0.253±0.12 0.816±0.44
ENSG00000172183 ENST00000306072 N/A N/A N/A 0.099±0.00 N/A N/A 0.127±0.00 N/A 0.188±0.00 N/A N/A 0.605±0.30 0.945±0.37 0.718±0.00
ENST00000379224 N/A N/A 0.134±0.00 N/A 5.196±0.00 5.988±0.00 N/A N/A N/A N/A N/A 1.983±0.00 N/A N/A
ENST00000546338 N/A N/A N/A N/A N/A N/A 0.813±0.00 2.195±0.00 N/A 54.661±0.00 1.577±0.00 N/A N/A N/A
ENST00000557824 N/A 2.215±0.00 N/A 0.185±0.10 0.394±0.13 0.381±0.00 0.054±0.00 0.143±0.00 0.072±0.00 N/A N/A 0.426±0.24 N/A 0.130±0.00
ENST00000558236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558942 N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A
ENST00000558992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559876 31.346±0.00 36.480±0.00 N/A 2.846±0.00 4.826±0.00 14.429±0.00 0.987±0.00 1.589±0.74 2.890±0.00 67.616±64.79 2.008±0.00 7.887±4.46 3.950±0.00 3.424±0.11
ENST00000560573 N/A 3.080±0.00 N/A N/A N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560741 16.537±0.00 N/A N/A 0.639±0.27 3.216±0.35 4.851±1.88 0.387±0.04 N/A 1.378±0.46 3.337±0.00 1.276±0.00 11.312±7.81 8.542±4.36 3.944±1.38
ENST00000560746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259676 ENST00000561358 N/A 0.221±0.00 N/A 0.103±0.00 0.048±0.00 0.044±0.00 N/A 0.047±0.00 N/A 0.326±0.00 N/A 0.154±0.06 0.087±0.00 0.692±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030607 ENSMUST00000032835 0.019±0.02 0.641±0.41 N/A 0.524±0.49 0.011±0.00 0.005±0.00 0.112±0.08 0.003±0.00 0.008±0.01 0.104±0.09 0.009±0.00 0.326±0.12 0.294±0.12 0.093±0.03
ENSMUSG00000039236 ENSMUST00000038142 8.634±0.35 0.997±0.40 17.404±1.35 0.223±0.00 3.957±2.60 9.325±2.22 5.725±4.04 2.391±0.50 11.932±10.47 17.124±0.66 0.573±0.08 14.679±4.90 75.520±25.66 14.822±1.00
ENSMUST00000118867 3.163±0.00 2.480±1.21 N/A 0.154±0.00 5.085±0.86 8.778±0.97 N/A N/A 0.850±0.06 N/A 0.202±0.00 28.744±8.79 N/A 50.025±13.36
ENSMUST00000120331 3.681±1.00 1.857±0.62 N/A 0.224±0.06 3.864±1.22 11.643±2.07 15.188±12.69 2.165±0.58 22.735±23.58 18.133±9.74 0.542±0.10 15.843±5.71 54.807±4.13 N/A
ENSMUST00000121645 N/A 0.525±0.00 N/A 0.351±0.00 1.858±0.42 3.205±0.00 0.628±0.00 0.863±0.00 0.427±0.22 2.402±0.00 0.214±0.06 N/A N/A 57.012±2.03
ENSMUST00000133042 N/A 0.580±0.12 N/A 0.112±0.00 1.761±0.09 N/A N/A N/A 3.330±3.74 4.988±1.59 N/A 6.363±1.08 N/A N/A
ENSMUSG00000097441 ENSMUST00000180546 N/A 0.037±0.00 N/A 0.050±0.06 N/A N/A N/A N/A N/A N/A N/A 0.067±0.04 0.002±0.00 0.007±0.00

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