C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-related transmembrane protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038228 Tmx4-001 ENSMUSG00000034723 10090 - 2:134594185-134644145 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038228 3.660±0.88 6.223±1.25 2.534±1.69 10.446±5.69 3.233±0.39 1.969±0.51 8.635±0.52 4.112±0.29 3.265±1.45 5.195±0.40 2.068±0.17 8.139±3.50 2.761±0.78 9.550±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BM CIL_0002BM_0002 CGP 2:134497361-134644145
CIL_0006F4 CIL_0006F4_0002 CGP 2:134594185-135475258

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005783 IBA endoplasmic reticulum
GO:0006457 IBA protein folding
GO:0016021 IEA integral component of membrane
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246024 TMX4-001 protein_coding Homo_sapiens 0 998
ENST00000462384 TMX4-002 nonsense_mediated_decay Homo_sapiens 0 593
ENST00000527925 TMX4-003 protein_coding Homo_sapiens 0 370
ENST00000530935 TMX4-004 processed_transcript Homo_sapiens 0 579

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