C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038523 Ric8b-201 ENSMUSG00000035620 10090 + 10:84917616-85016446 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038523
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038523 4.354±1.80 9.175±0.92 2.756±0.02 5.165±0.73 4.435±2.59 5.651±0.97 4.145±0.62 3.576±1.62 1.874±0.83 4.397±1.04 5.452±0.49 7.701±2.68 1.115±0.24 0.723±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MF CIL_0001MF_0002 CGP 10:84756062-85016446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001965 IEA G-protein alpha-subunit binding
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0008277 IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355478 RIC8B-002 protein_coding Homo_sapiens 0 2206
ENST00000392837 RIC8B-001 protein_coding Homo_sapiens 0 3639
ENST00000392839 RIC8B-006 protein_coding Homo_sapiens 0 2364
ENST00000462949 RIC8B-003 nonsense_mediated_decay Homo_sapiens 0 2477
ENST00000470628 RIC8B-005 retained_intron Homo_sapiens 0 2425
ENST00000470960 RIC8B-004 nonsense_mediated_decay Homo_sapiens 0 1085
ENST00000546449 RIC8B-010 nonsense_mediated_decay Homo_sapiens 0 488
ENST00000548914 RIC8B-012 protein_coding Homo_sapiens 0 922
ENST00000549643 RIC8B-008 protein_coding Homo_sapiens 0 422
ENST00000550215 RIC8B-007 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000551756 RIC8B-011 retained_intron Homo_sapiens 0 488
ENST00000552619 RIC8B-009 protein_coding Homo_sapiens 0 370

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