C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIC8 guanine nucleotide exchange factor B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462949 RIC8B-003 ENSG00000111785 9606 + 12:106774714-106887290 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonMuscleOvaryPlacentaTestisENST00000462949
Transcript ID Adipose Colon Muscle Ovary Placenta Testis
ENST00000462949 0.711±0.00 1.659±0.00 0.880±0.00 1.169±0.00 0.854±0.13 1.197±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MF CIL_0001MF_0001 CGP 12:106582907-106889316

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001965 IDA G-protein alpha-subunit binding
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005488 IEA binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0008277 IDA regulation of G-protein coupled receptor protein signaling pathway
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038523 Ric8b-201 protein_coding Mus_musculus 0 2477
ENSMUST00000095385 Ric8b-202 protein_coding Mus_musculus 0 2259

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