C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 9B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038696 Ppp1r9b-001 ENSMUSG00000038976 10090 + 11:94991035-95006899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038696
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038696 20.933±2.51 14.901±7.64 7.919±1.28 88.231±97.72 15.843±8.95 10.263±2.57 4.708±1.12 7.985±0.58 5.110±5.17 20.040±1.76 5.766±0.34 18.613±7.40 12.002±6.92 3.657±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001932 IMP regulation of protein phosphorylation
GO:0003779 TAS actin binding
GO:0005515 IPI protein binding
GO:0005654 IEA nucleoplasm
GO:0005737 ISS cytoplasm
GO:0005886 ISS plasma membrane
GO:0007015 IPI actin filament organization
GO:0016358 IMP dendrite development
GO:0016477 ISS cell migration
GO:0019722 IMP calcium-mediated signaling
GO:0030027 ISS lamellipodium
GO:0030036 TAS actin cytoskeleton organization
GO:0030054 IEA cell junction
GO:0030175 IDA filopodium
GO:0030308 IEA negative regulation of cell growth
GO:0030864 IDA cortical actin cytoskeleton
GO:0032587 ISS ruffle membrane
GO:0045202 IEA synapse
GO:0046847 ISS filopodium assembly
GO:0071315 IMP cellular response to morphine
GO:2000474 IMP regulation of opioid receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000513579 PPP1R9B-003 processed_transcript Homo_sapiens 0 351
ENST00000612501 PPP1R9B-001 protein_coding Homo_sapiens 0 4034

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