C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 9B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612501 PPP1R9B-001 ENSG00000108819 9606 - 17:50133735-50150630 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000612501
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000612501 22.686±0.00 47.802±0.00 0.543±0.00 33.337±26.63 11.782±9.86 10.669±9.36 3.085±2.73 9.328±8.45 3.029±0.73 25.559±23.60 5.502±0.00 44.210±33.73 21.104±6.54 39.411±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000164 TAS protein phosphatase type 1 complex
GO:0001560 TAS regulation of cell growth by extracellular stimulus
GO:0001932 IEA regulation of protein phosphorylation
GO:0003779 IEA actin binding
GO:0004864 NAS protein phosphatase inhibitor activity
GO:0005515 IPI:IEA protein binding
GO:0005654 IMP nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007015 IEA actin filament organization
GO:0007050 TAS cell cycle arrest
GO:0007096 NAS regulation of exit from mitosis
GO:0008157 NAS protein phosphatase 1 binding
GO:0008380 NAS RNA splicing
GO:0016358 IEA dendrite development
GO:0016477 IMP cell migration
GO:0019722 IEA calcium-mediated signaling
GO:0030027 IDA lamellipodium
GO:0030054 IEA cell junction
GO:0030175 IDA filopodium
GO:0030308 IDA negative regulation of cell growth
GO:0030864 IEA cortical actin cytoskeleton
GO:0032587 IDA ruffle membrane
GO:0042127 NAS regulation of cell proliferation
GO:0043086 NAS negative regulation of catalytic activity
GO:0045202 IEA synapse
GO:0046847 IMP filopodium assembly
GO:0071315 ISS cellular response to morphine
GO:2000474 ISS regulation of opioid receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038696 Ppp1r9b-001 protein_coding Mus_musculus 0 4034
ENSMUST00000107748 Ppp1r9b-002 protein_coding Mus_musculus 0 2076
ENSMUST00000151771 Ppp1r9b-003 processed_transcript Mus_musculus 0 403
ENSDART00000091489 CT971495.1-201 processed_pseudogene Danio_rerio 4e-22 111
ENSDART00000109521 PPP1R9B (1 of 2)-201 protein_coding Danio_rerio 4e-22 111

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