C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038772 Tmem5-002 ENSMUSG00000034620 10090 - 10:122081260-122097156 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038772 4.006±0.47 3.037±0.45 4.167±1.87 4.131±1.88 2.552±1.24 1.878±0.46 2.728±0.34 2.926±0.48 2.315±0.96 2.250±0.54 10.710±1.50 5.376±4.41 14.912±5.19 1.210±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YB CIL_0006YB_0002 CGP 10:121780991-122097371

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261234 TMEM5-001 protein_coding Homo_sapiens 0 1284
ENST00000536219 TMEM5-006 retained_intron Homo_sapiens 0 278
ENST00000537373 TMEM5-003 protein_coding Homo_sapiens 0 1284
ENST00000537982 TMEM5-007 processed_transcript Homo_sapiens 0 244
ENST00000543342 TMEM5-002 nonsense_mediated_decay Homo_sapiens 0 1114

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