C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034620 Tmem5 10090 - 10:122078114-122097371 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038772 Tmem5-002 122081260-122097156 nonsense_mediated_decay
  ENSMUST00000125506 Tmem5-006 122081682-122089389 retained_intron
  ENSMUST00000129359 Tmem5-004 122088645-122090705 retained_intron
  ENSMUST00000135083 Tmem5-003 122096056-122097126 processed_transcript
  ENSMUST00000140299 Tmem5-001 122078114-122097371 protein_coding
  ENSMUST00000141057 Tmem5-005 122089022-122096136 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038772ENSMUST00000135083ENSMUST00000140299ENSMUST00000141057
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038772 4.006±0.47 3.037±0.45 4.167±1.87 4.131±1.88 2.552±1.24 1.878±0.46 2.728±0.34 2.926±0.48 2.315±0.96 2.250±0.54 10.710±1.50 5.376±4.41 14.912±5.19 1.210±0.46
ENSMUST00000135083 N/A 6.359±2.72 N/A N/A 2.379±0.15 2.639±0.30 N/A N/A 1.543±0.34 N/A N/A 5.329±1.73 N/A N/A
ENSMUST00000140299 1.211±0.33 5.513±1.09 0.850±0.26 0.705±0.12 1.207±0.55 1.853±0.28 0.406±0.12 0.719±0.43 0.527±0.17 1.763±0.33 0.591±0.15 2.412±1.68 0.902±0.17 0.235±0.08
ENSMUST00000141057 N/A N/A N/A 1.968±0.00 N/A N/A N/A N/A 2.210±0.33 N/A 4.167±0.51 11.530±0.27 14.193±6.49 2.389±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YB CIL_0006YB_0002 CGP 10:121780991-122097371

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063414 tmem5 transmembrane protein 5 protein_coding Danio_rerio
ENSG00000118600 TMEM5 transmembrane protein 5 protein_coding Homo_sapiens

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