C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucyl-tRNA synthetase, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038863 Lars2-201 ENSMUSG00000035202 10090 + 9:123366940-123462664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000038863
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000038863 47.521±28.34 176.579±61.62 177.365±90.05 296.666±7.31 640.014±0.00 678.407±8.35 365.347±18.66 72.637±45.91 43.724±26.47 103.590±164.81 419.574±99.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073N CIL_00073N_0002 CGP 9:123259058-123462664
CIL_00073L CIL_00073L_0002 CGP 9:123366940-123521548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002161 IEA aminoacyl-tRNA editing activity
GO:0004823 IEA leucine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006429 IEA leucyl-tRNA aminoacylation
GO:0006450 IEA regulation of translational fidelity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123459 BX296557.7-201 protein_coding Danio_rerio 0 285
ENSDART00000125433 CT956064.3-201 protein_coding Danio_rerio 0 285
ENSDART00000127411 AL935186.6-201 protein_coding Danio_rerio 0 276
ENSDART00000130501 BX548011.3-201 protein_coding Danio_rerio 0 276
ENSDART00000109980 lars2-201 protein_coding Danio_rerio 9e-29 134
ENST00000265537 LARS2-001 protein_coding Homo_sapiens 0 2760
ENST00000414984 LARS2-003 protein_coding Homo_sapiens 0 2435
ENST00000415258 LARS2-002 protein_coding Homo_sapiens 0 2760
ENST00000467936 LARS2-008 processed_transcript Homo_sapiens 0 704

Loading