C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00073N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000249992-ENSG00000011376 CGP 9606 3:45224466-45549421
GeneTranscriptPositionBiotype
ENSG00000011376 (LARS2)
leucyl-tRNA synthetase 2, mitochondrial
ENST00000265537 (LARS2-001) 45388506-45548837 protein_coding
ENST00000414984 (LARS2-003) 45388564-45547609 protein_coding
ENST00000415258 (LARS2-002) 45388561-45549421 protein_coding
ENST00000430399 (LARS2-005) 45388619-45400353 protein_coding
ENST00000431023 (LARS2-006) 45388564-45446935 protein_coding
ENST00000467936 (LARS2-008) 45500541-45538463 processed_transcript
ENST00000474585 (LARS2-009) 45541594-45547554 processed_transcript
ENST00000485461 (LARS2-007) 45517963-45547404 processed_transcript
ENSG00000202268 (U3)
Small nucleolar RNA U3
ENST00000365398 (U3.1-217) 45255409-45255620 snoRNA
ENSG00000232455 (LARS2-AS1)
LARS2 antisense RNA 1
ENST00000442534 (LARS2-AS1-001) 45483974-45509545 antisense
ENSG00000249992 (TMEM158)
transmembrane protein 158 (gene/pseudogene)
ENST00000503771 (TMEM158-001) 45224466-45226278 protein_coding
CIL_00073N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054871-ENSMUSG00000035202 CGP 10090 9:123259058-123462664
GeneTranscriptPositionBiotype
ENSMUSG00000035202 (Lars2)
leucyl-tRNA synthetase, mitochondrial
ENSMUST00000038863 (Lars2-201) 123366940-123462664 protein_coding
ENSMUSG00000054871 (Tmem158)
transmembrane protein 158
ENSMUST00000068140 (Tmem158-201) 123259058-123260789 protein_coding
ENSMUSG00000058492 (Scp2-ps2)
sterol carrier protein 2, pseudogene 2
ENSMUST00000072166 (Scp2-ps2-201) 123307508-123307939 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073N_0001ENSG00000011376ENST00000265537ENST00000414984ENST00000415258ENST00000430399ENST00000431023ENST00000467936ENST00000474585ENST00000485461ENSG00000202268ENST00000365398ENSG00000232455ENST00000442534ENSG00000249992ENST00000503771CIL_00073N_0002ENSMUSG00000035202ENSMUST00000038863ENSMUSG00000054871ENSMUST00000068140ENSMUSG00000058492ENSMUST00000072166
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073N_0001ENSG00000011376ENST00000265537ENST00000415258ENST00000467936ENSG00000202268ENST00000365398ENSG00000232455ENST00000442534ENSG00000249992ENST00000503771CIL_00073N_0002ENSMUSG00000035202ENSMUST00000038863ENSMUSG00000054871ENSMUST00000068140ENSMUSG00000058492ENSMUST00000072166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000011376 ENST00000265537 1.851±0.00 2.217±0.00 1.003±0.00 3.407±0.93 1.745±0.70 2.161±0.08 2.220±1.58 3.636±2.86 1.753±0.87 1.764±0.07 0.981±0.18 2.567±1.34 3.911±1.20 2.326±0.43
ENST00000414984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415258 0.204±0.00 N/A 0.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.543±0.00 0.462±0.00
ENST00000430399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467936 N/A N/A 1.539±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.024±0.00 1.758±0.00 2.944±0.00
ENST00000474585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202268 ENST00000365398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.275±0.00 N/A 0.234±0.00
ENSG00000232455 ENST00000442534 N/A 0.109±0.00 N/A N/A N/A 0.556±0.00 0.074±0.00 0.055±0.00 N/A N/A N/A 0.051±0.00 0.049±0.00 N/A
ENSG00000249992 ENST00000503771 0.618±0.00 2.018±0.00 N/A 3.269±1.91 1.029±0.40 3.323±2.87 0.206±0.00 2.027±0.00 0.237±0.15 0.826±0.64 1.822±0.00 3.788±2.43 2.131±0.33 7.112±2.47
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035202 ENSMUST00000038863 N/A 47.521±28.34 N/A 176.579±61.62 177.365±90.05 296.666±7.31 640.014±0.00 678.407±8.35 365.347±18.66 N/A 72.637±45.91 43.724±26.47 103.590±164.81 419.574±99.37
ENSMUSG00000054871 ENSMUST00000068140 11.180±6.30 11.503±2.22 15.515±1.99 19.942±3.55 39.649±12.12 15.128±1.24 0.955±0.39 2.146±0.62 1.821±2.07 4.102±1.02 0.558±0.13 27.176±14.38 2.637±0.65 0.260±0.10
ENSMUSG00000058492 ENSMUST00000072166 5.928±3.17 5.868±1.34 0.774±0.35 0.289±0.12 1.093±0.43 1.406±0.66 2.129±0.85 6.331±2.45 24.607±24.20 0.545±0.22 0.195±0.09 1.792±1.19 0.277±0.08 0.185±0.08

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