C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00073L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000011376-ENSG00000144791 CGP 9606 3:45388506-45686338
GeneTranscriptPositionBiotype
ENSG00000011376 (LARS2)
leucyl-tRNA synthetase 2, mitochondrial 		ENST00000265537 (LARS2-001) 45388506-45548837 protein_coding
ENST00000414984 (LARS2-003) 45388564-45547609 protein_coding
ENST00000415258 (LARS2-002) 45388561-45549421 protein_coding
ENST00000430399 (LARS2-005) 45388619-45400353 protein_coding
ENST00000431023 (LARS2-006) 45388564-45446935 protein_coding
ENST00000467936 (LARS2-008) 45500541-45538463 processed_transcript
ENST00000474585 (LARS2-009) 45541594-45547554 processed_transcript
ENST00000485461 (LARS2-007) 45517963-45547404 processed_transcript
ENSG00000144791 (LIMD1)
LIM domains containing 1 		ENST00000273317 (LIMD1-001) 45594859-45686338 protein_coding
ENST00000440097 (LIMD1-002) 45594324-45673898 protein_coding
ENST00000465039 (LIMD1-004) 45555394-45673506 processed_transcript
ENST00000474665 (LIMD1-003) 45665675-45674566 retained_intron
ENSG00000232455 (LARS2-AS1)
LARS2 antisense RNA 1 		ENST00000442534 (LARS2-AS1-001) 45483974-45509545 antisense
CIL_00073L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035202-ENSMUSG00000025239 CGP 10090 9:123366940-123521548
GeneTranscriptPositionBiotype
ENSMUSG00000025239 (Limd1)
LIM domains containing 1 		ENSMUST00000026269 (Limd1-201) 123478701-123521548 protein_coding
ENSMUSG00000035202 (Lars2)
leucyl-tRNA synthetase, mitochondrial 		ENSMUST00000038863 (Lars2-201) 123366940-123462664 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073L_0001ENSG00000011376ENST00000265537ENST00000414984ENST00000415258ENST00000430399ENST00000431023ENST00000467936ENST00000474585ENST00000485461ENSG00000144791ENST00000273317ENST00000440097ENST00000465039ENST00000474665ENSG00000232455ENST00000442534CIL_00073L_0002ENSMUSG00000025239ENSMUST00000026269ENSMUSG00000035202ENSMUST00000038863
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073L_0001ENSG00000011376ENST00000265537ENST00000415258ENST00000467936ENSG00000144791ENST00000273317ENST00000440097ENSG00000232455ENST00000442534CIL_00073L_0002ENSMUSG00000025239ENSMUST00000026269ENSMUSG00000035202ENSMUST00000038863
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000011376 ENST00000265537 1.851±0.00 2.217±0.00 1.003±0.00 3.407±0.93 1.745±0.70 2.161±0.08 2.220±1.58 3.636±2.86 1.753±0.87 1.764±0.07 0.981±0.18 2.567±1.34 3.911±1.20 2.326±0.43
ENST00000414984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415258 0.204±0.00 N/A 0.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.543±0.00 0.462±0.00
ENST00000430399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467936 N/A N/A 1.539±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.024±0.00 1.758±0.00 2.944±0.00
ENST00000474585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144791 ENST00000273317 2.321±0.00 1.428±0.00 N/A N/A 1.808±0.00 1.490±0.26 2.747±0.00 N/A 2.590±0.00 3.473±1.22 2.975±1.77 1.525±0.42 1.301±0.10 1.512±0.00
ENST00000440097 N/A N/A N/A N/A 3.519±0.00 N/A N/A N/A N/A N/A 1.595±0.00 N/A N/A N/A
ENST00000465039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232455 ENST00000442534 N/A 0.109±0.00 N/A N/A N/A 0.556±0.00 0.074±0.00 0.055±0.00 N/A N/A N/A 0.051±0.00 0.049±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025239 ENSMUST00000026269 20.552±3.73 13.939±0.71 13.268±0.02 3.241±1.40 19.732±2.61 16.525±3.70 10.787±1.69 18.072±1.07 8.894±2.17 18.728±3.47 19.026±0.79 20.499±5.28 28.499±11.87 2.671±1.31
ENSMUSG00000035202 ENSMUST00000038863 N/A 47.521±28.34 N/A 176.579±61.62 177.365±90.05 296.666±7.31 640.014±0.00 678.407±8.35 365.347±18.66 N/A 72.637±45.91 43.724±26.47 103.590±164.81 419.574±99.37

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