C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD6 antigen
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039043 Cd6-004 ENSMUSG00000024670 10090 - 19:10789349-10829964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000039043
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000039043 0.092±0.00 0.046±0.00 1.910±0.63 0.062±0.00 0.078±0.00 0.080±0.00 0.030±0.02 0.218±0.06 0.042±0.01 0.136±0.14 0.010±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0006898 IEA receptor-mediated endocytosis
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313421 CD6-001 protein_coding Homo_sapiens 0 736
ENST00000344931 CD6-004 nonsense_mediated_decay Homo_sapiens 0 736
ENST00000352009 CD6-008 protein_coding Homo_sapiens 0 658
ENST00000433107 CD6-006 protein_coding Homo_sapiens 5e-27 126
ENST00000452451 CD6-007 protein_coding Homo_sapiens 0 942
ENST00000505761 CD6-014 retained_intron Homo_sapiens 0 252
ENST00000541964 CD6-012 retained_intron Homo_sapiens 0 318

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