C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 17F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039046 Il17f-001 ENSMUSG00000041872 10090 - 1:20777146-20784270 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverMuscleOvaryTestisENSMUST00000039046
Transcript ID Brain Colon Kidney Liver Muscle Ovary Testis
ENSMUST00000039046 0.056±0.00 0.135±0.01 0.123±0.07 0.068±0.03 0.043±0.00 0.180±0.09 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081C CIL_00081C_0002 VISTA 1:20619958-21222635
CIL_0005N3 CIL_0005N3_0002 CGP 1:20730905-20790617
CIL_0005N2 CIL_0005N2_0002 CGP 1:20777146-20820312

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005126 IPI cytokine receptor binding
GO:0005615 IDA extracellular space
GO:0006029 IEA proteoglycan metabolic process
GO:0006954 IEA inflammatory response
GO:0016525 IEA negative regulation of angiogenesis
GO:0017015 IEA regulation of transforming growth factor beta receptor signaling pathway
GO:0019955 IEA cytokine binding
GO:0042089 IEA cytokine biosynthetic process
GO:0042109 IEA lymphotoxin A biosynthetic process
GO:0042803 IEA protein homodimerization activity
GO:0045076 IEA regulation of interleukin-2 biosynthetic process
GO:0045408 IEA regulation of interleukin-6 biosynthetic process
GO:0045414 IEA regulation of interleukin-8 biosynthetic process
GO:0045423 IEA regulation of granulocyte macrophage colony-stimulating factor biosynthetic process
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051216 IEA cartilage development
GO:1900017 IDA positive regulation of cytokine production involved in inflammatory response

Homologs

No Homologs available.

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