C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fras1 related extracellular matrix protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039695 Frem3-001 ENSMUSG00000042353 10090 + 8:80611080-80695356 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039695
Transcript ID Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039695 0.009±0.00 0.245±0.22 0.010±0.00 0.004±0.00 0.047±0.04 0.006±0.00 0.008±0.00 0.083±0.04 0.017±0.01 0.121±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YO CIL_0008YO_0002 VISTA 8:80014046-80615940
CIL_0008KM CIL_0008KM_0002 VISTA 8:80201065-80801915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005604 IDA basement membrane
GO:0005615 IEA extracellular space
GO:0007154 IEA cell communication
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329798 FREM3-001 protein_coding Homo_sapiens 0 3609

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