C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thrombospondin, type I, domain containing 7B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040311 Thsd7b-002 ENSMUSG00000042581 10090 + 1:129273463-130050352 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungPlacentaENSMUST00000040311
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Placenta
ENSMUST00000040311 0.056±0.02 0.068±0.00 0.019±0.00 0.048±0.00 0.063±0.00 0.030±0.00 0.013±0.00 0.013±0.00 0.017±0.00 0.032±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VZ CIL_0006VZ_0002 CGP 1:128588199-130219278

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272643 THSD7B-201 protein_coding Homo_sapiens 0 2800
ENST00000409968 THSD7B-001 protein_coding Homo_sapiens 0 2974
ENST00000413152 THSD7B-202 protein_coding Homo_sapiens 0 2667
ENST00000472720 THSD7B-002 nonsense_mediated_decay Homo_sapiens 0 313

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