C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FCH domain only 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040340 Fcho2-201 ENSMUSG00000041685 10090 - 13:98723407-98815449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040340
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040340 6.593±1.62 3.181±0.89 4.729±0.60 2.270±1.25 3.637±0.92 4.758±2.00 2.898±1.26 6.669±2.07 6.855±5.39 7.447±3.48 1.464±0.86 4.488±2.92 4.649±4.35 1.288±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KX CIL_0007KX_0002 UCNEbase 13:98476724-98844627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 IDA phosphatidylserine binding
GO:0005515 IPI protein binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0005886 IDA plasma membrane
GO:0005905 IDA coated pit
GO:0010324 IDA membrane invagination
GO:0030136 IDA clathrin-coated vesicle
GO:0035091 IDA phosphatidylinositol binding
GO:0048268 ISS clathrin coat assembly
GO:0072583 ISS clathrin-mediated endocytosis
GO:0072659 IMP protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287761 FCHO2-002 protein_coding Homo_sapiens 0 1317
ENST00000430046 FCHO2-001 protein_coding Homo_sapiens 0 4065
ENST00000503302 FCHO2-005 retained_intron Homo_sapiens 0 305
ENST00000507345 FCHO2-007 protein_coding Homo_sapiens 0 800
ENST00000508431 FCHO2-004 retained_intron Homo_sapiens 0 623
ENST00000512348 FCHO2-006 protein_coding Homo_sapiens 0 2348

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