C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361915 AGL-001 ENSG00000162688 9606 + 1:99850084-99924020 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361915
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361915 1.811±0.00 1.463±0.00 0.497±0.00 1.881±0.00 2.441±0.00 1.623±0.63 6.006±0.00 1.510±0.00 2.114±0.66 0.677±0.00 4.143±0.00 0.590±0.15 1.479±0.35 1.160±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CF CIL_0007CF_0002 CGP 1:99708703-99924023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004133 TAS glycogen debranching enzyme activity
GO:0004134 IBA:IEA 4-alpha-glucanotransferase activity
GO:0004135 IBA:IEA amylo-alpha-1,6-glucosidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0005978 IEA glycogen biosynthetic process
GO:0005980 IBA:IEA glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0043033 TAS isoamylase complex
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040603 Agl-201 protein_coding Mus_musculus 0 5059
ENSMUST00000162792 Agl-007 protein_coding Mus_musculus 0 5051
ENSMUST00000159742 Agl-002 retained_intron Mus_musculus 0 4143
ENSMUST00000161336 Agl-004 nonsense_mediated_decay Mus_musculus 0 3022
ENSMUST00000160484 Agl-006 protein_coding Mus_musculus 0 2728
ENSMUST00000162040 Agl-003 retained_intron Mus_musculus 0 815
ENSMUST00000159670 Agl-008 protein_coding Mus_musculus 0 501

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