C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NIPA-like domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040791 Nipal2-201 ENSMUSG00000038879 10090 - 15:34572799-34678706 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040791 0.761±0.62 1.965±0.64 3.135±1.14 1.109±0.19 2.972±1.08 6.383±0.24 0.140±0.03 1.290±0.24 0.104±0.05 5.994±0.72 0.040±0.01 1.597±0.66 0.269±0.14 0.270±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003C8 CIL_0003C8_0002 CGP 15:34495304-34678706
CIL_0008YL CIL_0008YL_0002 VISTA 15:34528818-35129716

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IEA magnesium ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341166 NIPAL2-001 protein_coding Homo_sapiens 0 1262
ENST00000430223 NIPAL2-002 protein_coding Homo_sapiens 0 1402
ENST00000519324 NIPAL2-005 retained_intron Homo_sapiens 0 337
ENST00000520545 NIPAL2-004 processed_transcript Homo_sapiens 0 819
ENST00000521820 NIPAL2-003 retained_intron Homo_sapiens 0 281

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