C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAP6 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040880 Map6d1-201 ENSMUSG00000041205 10090 - 16:20233310-20241358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040880
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040880 0.099±0.06 4.994±1.29 0.218±0.06 2.116±1.06 0.301±0.04 0.069±0.02 0.128±0.05 0.056±0.02 0.037±0.01 0.028±0.02 0.027±0.01 1.717±0.72 0.048±0.03 0.586±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YG CIL_0003YG_0003 CGP 16:20141063-20241358
CIL_0005G0 CIL_0005G0_0002 CGP 16:20233310-20302387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0005516 IPI calmodulin binding
GO:0005798 IDA Golgi-associated vesicle
GO:0005801 IDA cis-Golgi network
GO:0005874 IEA microtubule
GO:0007026 IDA negative regulation of microtubule depolymerization
GO:0008017 IDA microtubule binding
GO:0018009 IDA N-terminal peptidyl-L-cysteine N-palmitoylation
GO:0032418 IEA lysosome localization
GO:0048813 IEA dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318631 MAP6D1-001 protein_coding Homo_sapiens 0 449
ENST00000431348 MAP6D1-002 protein_coding Homo_sapiens 0 374
ENST00000445426 MAP6D1-003 nonsense_mediated_decay Homo_sapiens 0 364

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