C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H1c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040914 Hist1h1c-001 ENSMUSG00000036181 10090 + 13:23738808-23740367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040914
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040914 45.590±9.06 27.685±3.55 69.159±0.15 4.355±2.12 29.048±4.09 131.414±11.14 35.876±1.13 42.767±2.46 30.695±15.59 27.961±1.63 95.661±11.76 23.545±6.15 17.190±9.53 3.291±1.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005719 IEA nuclear euchromatin
GO:0006334 IEA nucleosome assembly
GO:0016584 IMP nucleosome positioning
GO:0031490 IEA chromatin DNA binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304218 HIST1H1E-001 protein_coding Homo_sapiens 0 475
ENST00000331442 HIST1H1B-001 protein_coding Homo_sapiens 0 337
ENST00000343677 HIST1H1C-001 protein_coding Homo_sapiens 0 534

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