C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H1c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343677 HIST1H1C-001 ENSG00000187837 9606 - 6:26055787-26056428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343677 11.767±0.00 46.805±0.00 24.939±0.00 15.368±4.74 47.962±9.08 35.625±19.09 44.769±23.84 25.946±8.50 85.129±41.61 52.810±17.03 41.868±20.86 29.213±27.10 45.567±33.07 8.446±6.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005719 IDA nuclear euchromatin
GO:0006334 IEA nucleosome assembly
GO:0016584 IEA nucleosome positioning
GO:0031490 IDA chromatin DNA binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040914 Hist1h1c-001 protein_coding Mus_musculus 0 534
ENSMUST00000045301 Hist1h1d-001 protein_coding Mus_musculus 0 394

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