C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H1e
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304218 HIST1H1E-001 ENSG00000168298 9606 + 6:26156391-26157050 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304218
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304218 0.950±0.00 23.894±0.00 22.745±22.47 38.758±38.07 27.078±26.61 10.443±10.39 19.119±18.54 21.276±21.22 17.592±16.43 16.822±0.00 18.873±31.67 0.546±0.19 0.421±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C2 CIL_0001C2_0006 CGP 6:26124145-26157050
CIL_0001C0 CIL_0001C0_0003 CGP 6:26156391-26171349

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005720 IDA nuclear heterochromatin
GO:0006334 IEA nucleosome assembly
GO:0016584 IEA nucleosome positioning
GO:0031490 IMP chromatin DNA binding
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062045 Hist1h1e-001 protein_coding Mus_musculus 0 713
ENSMUST00000045301 Hist1h1d-001 protein_coding Mus_musculus 0 536
ENSMUST00000040914 Hist1h1c-001 protein_coding Mus_musculus 0 475
ENSMUST00000080511 Hist1h1b-001 protein_coding Mus_musculus 0 385

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