C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041163 Wnt8b-201 ENSMUSG00000036961 10090 + 19:44493472-44514273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041163
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041163 0.124±0.03 0.075±0.04 0.012±0.00 0.745±0.56 0.029±0.01 0.312±0.08 0.009±0.00 0.061±0.02 0.005±0.00 0.018±0.01 0.018±0.01 0.052±0.03 0.011±0.00 0.151±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QB CIL_0007QB_0002 VISTA 19:44214132-44815870
CIL_00082U CIL_00082U_0002 VISTA 19:44330970-44933041
CIL_00082V CIL_00082V_0002 VISTA 19:44333644-44934226
CIL_00093R CIL_00093R_0002 VISTA 19:44370805-44971431
CIL_00093O CIL_00093O_0002 VISTA 19:44374626-44975238
CIL_0005E0 CIL_0005E0_0002 CGP 19:44394451-44514273
CIL_0008BC CIL_0008BC_0002 VISTA 19:44398597-45000718
CIL_0005E1 CIL_0005E1_0002 CGP 19:44493472-44545864

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005109 IBA frizzled binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0009887 TAS organ morphogenesis
GO:0010628 IMP positive regulation of gene expression
GO:0010629 IMP negative regulation of gene expression
GO:0016055 IBA Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0045165 IBA cell fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343737 WNT8B-001 protein_coding Homo_sapiens 0 1362

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