C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343737 WNT8B-001 ENSG00000075290 9606 + 10:100463041-100483744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000343737
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000343737 0.019±0.00 0.104±0.00 0.066±0.00 0.061±0.03 0.138±0.00 0.070±0.00 0.149±0.00 0.151±0.13 0.172±0.08 0.029±0.00 0.213±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QB CIL_0007QB_0001 VISTA 10:100185085-100786577
CIL_00082U CIL_00082U_0001 VISTA 10:100312457-100914449
CIL_00082V CIL_00082V_0001 VISTA 10:100315129-100915721
CIL_0005E0 CIL_0005E0_0001 CGP 10:100347124-100483744
CIL_00093R CIL_00093R_0001 VISTA 10:100355158-100955821
CIL_00093O CIL_00093O_0001 VISTA 10:100359362-100959974
CIL_0008BC CIL_0008BC_0001 VISTA 10:100387324-100989228
CIL_0005E1 CIL_0005E1_0001 CGP 10:100463041-100519864

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005109 IBA frizzled binding
GO:0005576 TAS:IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0007165 TAS signal transduction
GO:0007275 IEA multicellular organismal development
GO:0007369 ISS gastrulation
GO:0007399 TAS nervous system development
GO:0010628 IEA positive regulation of gene expression
GO:0010629 IEA negative regulation of gene expression
GO:0016055 IBA:IEA Wnt signaling pathway
GO:0030182 ISS neuron differentiation
GO:0032355 NAS response to estradiol
GO:0032526 NAS response to retinoic acid
GO:0045165 IBA cell fate commitment
GO:0048263 ISS determination of dorsal identity
GO:0071300 ISS cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041163 Wnt8b-201 protein_coding Mus_musculus 0 1362
ENSDART00000049624 wnt8b-001 protein_coding Danio_rerio 0 695

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