C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin type III domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041266 Fndc4-201 ENSMUSG00000038552 10090 - 5:31292886-31295871 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041266 2.856±2.36 2.347±0.56 2.062±0.00 30.082±21.05 1.354±0.23 0.614±0.00 1.268±0.35 1.657±0.50 11.603±10.25 0.991±0.00 0.238±0.07 10.337±4.72 8.903±6.02 0.666±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010D CIL_00010D_0002 CGP 5:31253280-31295877
CIL_0001DA CIL_0001DA_0002 CGP 5:31292255-31327300

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264703 FNDC4-001 protein_coding Homo_sapiens 0 1105
ENST00000476197 FNDC4-003 retained_intron Homo_sapiens 0 809
ENST00000491414 FNDC4-002 retained_intron Homo_sapiens 0 438

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