C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041317 Ammecr1-001 ENSMUSG00000042225 10090 - X:142851146-142966728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041317
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041317 1.214±0.48 1.018±0.10 1.124±0.10 0.790±0.33 0.532±0.19 1.000±0.25 1.019±0.21 0.216±0.08 1.809±2.16 0.579±0.22 0.574±0.22 1.890±1.02 2.832±0.76 0.403±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079Y CIL_00079Y_0002 CGP X:142681406-142966728
CIL_00079X CIL_00079X_0002 CGP X:142851146-143104297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013814 ammecr1-001 protein_coding Danio_rerio 0 697
ENST00000262844 AMMECR1-001 protein_coding Homo_sapiens 0 1548
ENST00000372057 AMMECR1-002 protein_coding Homo_sapiens 0 1548
ENST00000372059 AMMECR1-005 protein_coding Homo_sapiens 0 1074
ENST00000473662 AMMECR1-003 processed_transcript Homo_sapiens 0 407
ENST00000496695 AMMECR1-004 processed_transcript Homo_sapiens 0 219

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