C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alpha- and gamma-adaptin binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041551 Aagab-201 ENSMUSG00000037257 10090 + 9:63602655-63641889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041551
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041551 11.532±2.35 16.284±1.75 13.246±2.02 16.722±0.98 12.305±1.52 20.188±1.45 6.121±0.38 14.535±1.77 11.152±3.13 9.514±0.91 6.179±0.28 21.810±2.25 10.453±1.86 7.442±2.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L5 CIL_0007L5_0002 UCNEbase 9:63176391-63881226
CIL_0008V3 CIL_0008V3_0002 VISTA 9:63223990-63824533
CIL_0008R9 CIL_0008R9_0002 VISTA 9:63580198-64181507

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261880 AAGAB-001 protein_coding Homo_sapiens 0 935
ENST00000538028 AAGAB-004 processed_transcript Homo_sapiens 0 370
ENST00000542650 AAGAB-002 protein_coding Homo_sapiens 0 856
ENST00000561452 AAGAB-003 protein_coding Homo_sapiens 0 856

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