C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alpha- and gamma-adaptin binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542650 AAGAB-002 ENSG00000103591 9606 - 15:67202740-67255195 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungMuscleOvaryENST00000542650
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary
ENST00000542650 3.831±0.00 7.525±0.00 8.555±0.00 2.110±0.00 2.566±0.00 3.533±0.00 4.135±0.00 4.029±0.00 9.847±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008R9 CIL_0008R9_0001 VISTA 15:66606636-67207796
CIL_0007L5 CIL_0007L5_0001 UCNEbase 15:66906943-67787880
CIL_00046Z CIL_00046Z_0002 CGP 15:67063763-67255195
CIL_0008V3 CIL_0008V3_0001 VISTA 15:67072826-67673347
CIL_0004H2 CIL_0004H2_0002 CGP 15:67201033-67502260

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041551 Aagab-201 protein_coding Mus_musculus 0 856

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