C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyridine nucleotide-disulphide oxidoreductase domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041852 Pyroxd1-001 ENSMUSG00000041671 10090 + 6:142345654-142363257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041852 1.809±0.29 4.361±0.41 2.718±0.48 2.709±0.17 1.477±0.49 4.037±0.76 1.127±0.18 2.308±0.22 1.762±0.27 2.531±0.31 1.037±0.24 2.662±0.69 2.368±0.29 2.436±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XQ CIL_0006XQ_0003 CGP 6:142298423-142363257
CIL_0005PY CIL_0005PY_0002 CGP 6:142345654-142387087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000240651 PYROXD1-001 protein_coding Homo_sapiens 0 1411
ENST00000375266 PYROXD1-004 nonsense_mediated_decay Homo_sapiens 0 1295
ENST00000531301 RP11-819M15.1-001 processed_pseudogene Homo_sapiens 0 1310
ENST00000536851 PYROXD1-008 retained_intron Homo_sapiens 0 446
ENST00000538072 PYROXD1-007 retained_intron Homo_sapiens 0 219
ENST00000538582 PYROXD1-005 protein_coding Homo_sapiens 0 1347
ENST00000538615 PYROXD1-010 retained_intron Homo_sapiens 0 433
ENST00000543476 PYROXD1-009 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000544187 PYROXD1-006 nonsense_mediated_decay Homo_sapiens 7e-31 137
ENST00000544970 PYROXD1-003 nonsense_mediated_decay Homo_sapiens 0 1009

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