C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nitric oxide synthase trafficker
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041865 Nostrin-001 ENSMUSG00000034738 10090 + 2:69135800-69189330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041865 0.356±0.11 0.320±0.22 2.276±0.14 0.654±0.67 0.303±0.16 2.863±1.17 0.765±0.02 0.365±0.19 2.929±0.96 6.044±2.14 0.174±0.09 1.222±1.41 28.167±13.49 0.098±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063C CIL_00063C_0002 CGP 2:68861441-69189330
CIL_0008HC CIL_0008HC_0002 VISTA 2:69119794-69721610
CIL_000639 CIL_000639_0002 CGP 2:69135800-69206194

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0031410 IEA cytoplasmic vesicle
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0050999 IEA regulation of nitric-oxide synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317647 NOSTRIN-001 protein_coding Homo_sapiens 0 1642
ENST00000397206 NOSTRIN-012 protein_coding Homo_sapiens 0 1423
ENST00000397209 NOSTRIN-004 protein_coding Homo_sapiens 0 1347
ENST00000444448 NOSTRIN-201 protein_coding Homo_sapiens 0 881
ENST00000445023 NOSTRIN-003 protein_coding Homo_sapiens 0 1435
ENST00000447264 NOSTRIN-007 protein_coding Homo_sapiens 0 828
ENST00000458381 NOSTRIN-002 protein_coding Homo_sapiens 0 881
ENST00000472260 NOSTRIN-005 retained_intron Homo_sapiens 0 486
ENST00000486873 NOSTRIN-010 retained_intron Homo_sapiens 0 470
ENST00000610364 NOSTRIN-002 protein_coding Homo_sapiens 0 887
ENST00000610378 NOSTRIN-003 protein_coding Homo_sapiens 0 1238
ENST00000611498 NOSTRIN-004 protein_coding Homo_sapiens 0 1225
ENST00000614172 NOSTRIN-005 retained_intron Homo_sapiens 0 492
ENST00000614842 NOSTRIN-013 protein_coding Homo_sapiens 0 1225
ENST00000618893 NOSTRIN-001 protein_coding Homo_sapiens 0 1238
ENST00000619846 NOSTRIN-007 protein_coding Homo_sapiens 0 521
ENST00000620000 NOSTRIN-010 retained_intron Homo_sapiens 0 470
ENST00000620516 NOSTRIN-012 protein_coding Homo_sapiens 0 1225

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